BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E12LP1|AL430076
(1110 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig531 427 e-119
>3x_Contig531
Length = 2671
Score = 427 bits (199), Expect = e-119
Identities = 217/221 (98%), Gaps = 2/221 (0%)
Strand = Plus / Minus
Query: 1 atggttacga-gagagaagcagagaccggtttgtagatgagatttgcatgaatatcggag 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 atggttacgaagagagaagcagagaccggtttgtagatgagatttgcatgaatatcggag 2297
Query: 60 tactgtcagtttggctatgctgaaaggttggacaattcacgaaattttgggcttccgacg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 tactgtcagtttggctatgctgaaaggttggacaattcacgaaattttgggcttccgacg 2237
Query: 120 ttaaagggctttatttttccgtttcgtggggaaatgttatgtg-aacttttcgagtwata 178
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||
Sbjct: 2236 ttaaagggctttatttttccgtttcgtggggaaaagttatgtgaaacttttcgagtaata 2177
Query: 179 ttgttccggcgttggtctatatatatatatatatatatata 219
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 ttgttccggcgttggtctatatatatatatatatatatata 2136
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.49 0.725 1.39
Gapped
Lambda K H
1.49 0.725 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,329
Number of Sequences: 1807
Number of extensions: 20329
Number of successful extensions: 6459
Number of sequences better than 1.0e-20: 1
length of query: 1110
length of database: 10,358,551
effective HSP length: 15
effective length of query: 1095
effective length of database: 10,331,446
effective search space: 11312933370
effective search space used: 11312933370
T: 0
A: 40
X1: 5 (10.7 bits)
X2: 13 (27.9 bits)
S1: 11 (24.0 bits)
S2: 47 (101.2 bits)